STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106946464Zgc:101810; Belongs to the actin family. (394 aa)    
Predicted Functional Partners:
LOC106941989
Actin related protein 3; Belongs to the actin family.
   
0.995
ACTR3B
Actin related protein 3B; Belongs to the actin family.
   
0.995
ACTR3
Actin related protein 3; Belongs to the actin family.
   
0.995
arpc3
Actin-related protein 2/3 complex subunit 3; Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.
   
 0.994
arpc2
Arp2/3 complex 34 kDa subunit; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.
   
 0.994
itsn1
Intersectin 1 (SH3 domain protein).
     
 0.991
LOC106954136
Intersectin 2b.
     
 0.991
ENSPLAP00000017806
Uncharacterized protein.
     
 0.991
ENSPLAP00000030866
Uncharacterized protein.
     
 0.991
ENSPLAP00000030875
Uncharacterized protein.
     
 0.991
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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