STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atat1Alpha-tubulin N-acetyltransferase 1; Specifically acetylates 'Lys-40' in alpha-tubulin on the lumenal side of microtubules. Promotes microtubule destabilization and accelerates microtubule dynamics; this activity may be independent of acetylation activity. Acetylates alpha-tubulin with a slow enzymatic rate, due to a catalytic site that is not optimized for acetyl transfer. Enters the microtubule through each end and diffuses quickly throughout the lumen of microtubules. Acetylates only long/old microtubules because of its slow acetylation rate since it does not have time to act on dyn [...] (283 aa)    
Predicted Functional Partners:
sirt2
NAD-dependent protein deacetylase; NAD-dependent protein deacetylase.
      
 0.536
LOC106960684
Liver-enriched gene 1, tandem duplicate 1.
      
 0.530
hdac6
Histone deacetylase 6.
   
  
 0.530
nanos3
Nanos homolog 3; Belongs to the nanos family.
      
 0.505
ttll4
Tubulin tyrosine ligase-like family, member 4.
      
 0.503
msh5
MutS homolog 5.
      
 0.493
ENSPLAP00000023678
Uncharacterized protein.
   
  
 0.430
ttll5
Tubulin tyrosine ligase-like family, member 5.
   
  
 0.430
eef1aknmt
Methyltransferase like 13.
      
 0.424
ttll12
Tubulin tyrosine ligase-like family, member 12.
      
 0.407
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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