Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
peli2Pellino E3 ubiquitin protein ligase family member 2. (424 aa)    
Predicted Functional Partners:
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.914
ENSPLAP00000010930
Uncharacterized protein.
    
 0.899
LOC106965283
Interleukin 1 receptor associated kinase 4.
    
 0.838
irak4
Interleukin-1 receptor-associated kinase 4.
    
 0.838
LOC106952860
Ubiquitin-conjugating enzyme E2 variant 1.
    
 0.766
LOC106953803
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.745
ube2n
Ubiquitin conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.745
ripk1
Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.
    
 0.718
ENSPLAP00000029696
UDP-glucuronate decarboxylase 1.
    
   0.702
ENSPLAP00000027506
Si:ch211-66k16.27.
    
 0.652
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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