Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
auts2Activator of transcription and developmental regulator AUTS2 a. (1283 aa)    
Predicted Functional Partners:
pcgf5
Polycomb group ring finger 5a.
    
 0.999
DCAF7
DDB1 and CUL4 associated factor 7.
   
 
 0.984
PCGF3
Polycomb group ring finger 3.
    
 0.976
pcgf1
Polycomb group ring finger 1.
    
 0.939
pcgf6
Polycomb group ring finger 6.
    
 0.933
LOC106958853
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.
    
 0.932
LOC106937748
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.
    
 0.932
rnf2
Ring finger protein 2.
    
 0.925
RING1
Ring finger protein 1.
    
 0.925
ENSPLAP00000002938
RanBP2-type domain-containing protein.
    
 0.915
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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