Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106958318RAP2A, member of RAS oncogene family b. (183 aa)    
Predicted Functional Partners:
nf1
Neurofibromin 1b.
    
 0.675
LOC106951344
Thymocyte selection-associated high mobility group box.
   
 
 0.656
LOC106954136
Intersectin 2b.
    
 0.645
ENSPLAP00000017806
Uncharacterized protein.
    
 0.645
ENSPLAP00000030866
Uncharacterized protein.
    
 0.645
ENSPLAP00000030875
Uncharacterized protein.
    
 0.645
LOC106961733
Rap guanine nucleotide exchange factor (GEF) 4.
    
 0.637
SIPA1
Signal-induced proliferation-associated 1.
    
 0.610
ralbp1
RalA binding protein 1.
    
 0.609
tsc2
TSC complex subunit 2.
    
 0.605
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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