STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106940284Si:ch73-281f12.4. (1136 aa)    
Predicted Functional Partners:
exoc4
Exocyst complex component 4.
    
 0.662
LOC106954534
RAB25, member RAS oncogene family a.
   
 0.649
LOC106951783
RAB11a, member RAS oncogene family, like.
   
 0.649
rab25
RAB25, member RAS oncogene family b.
   
 0.649
LOC106939992
RAB11a, member RAS oncogene family.
   
 0.649
LOC106949674
RAB11B, member RAS oncogene family, b.
   
 0.649
LOC106949673
RAB11B, member RAS oncogene family, a.
   
 0.649
LOC106935857
Uncharacterized protein.
   
 0.649
LOC106936372
Ras-related protein Rab-11A-like.
   
 0.649
rabl2a
RAB, member of RAS oncogene family-like 2.
   
 0.649
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.