STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fbxo8F-box protein 8. (299 aa)    
Predicted Functional Partners:
gbf1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
   
 
0.755
LOC106937352
Uncharacterized protein.
    
 0.739
arl1
ADP-ribosylation factor-like 1; Belongs to the small GTPase superfamily. Arf family.
    
 0.739
LOC106945789
J domain-containing protein.
   
  
 0.606
LOC106964148
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
   0.598
arl15
ADP-ribosylation factor-like 15a.
   
 0.544
ENSPLAP00000003034
ADP-ribosylation factor 6b.
    
 0.516
ENSPLAP00000005316
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.516
LOC106935881
Pleckstrin and Sec7 domain containing a.
     
 0.476
ENSPLAP00000006016
Pleckstrin and Sec7 domain containing 2.
     
 0.476
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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