Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000003344PDZ domain-containing protein. (421 aa)    
Predicted Functional Partners:
ENSPLAP00000003352
C2 domain-containing protein.
 
      0.843
LOC106959243
Uncharacterized protein.
    
 0.708
ENSPLAP00000016487
Unc-13 homolog Ba (C. elegans).
    
 0.708
UNC13C
Unc-13 homolog C.
    
 0.708
ENSPLAP00000027442
Uncharacterized protein.
    
 0.708
UNC13B
Unc-13 homolog B.
    
 0.708
UNC13A
Unc-13 homolog A.
    
 0.708
ENSPLAP00000029977
C2 domain-containing protein.
    
 0.708
LOC106934450
RIMS binding protein 2.
    
 0.654
ENSPLAP00000005331
Uncharacterized protein.
    
 0.654
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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