Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
LOC106963970Phosphatidylinositol transfer protein cytoplasmic 1b. (293 aa)    
Predicted Functional Partners:
agtrap
Angiotensin II receptor-associated protein.
    
 
 0.763
helz
Helicase with zinc finger.
      
 0.520
LOC106945402
BC1 (ubiquinol-cytochrome c reductase) synthesis-like; Belongs to the AAA ATPase family.
   
 
 0.422
rtf1
RTF1 homolog, Paf1/RNA polymerase II complex component.
      
 0.421
ublcp1
Ubiquitin-like domain containing CTD phosphatase 1.
    
 0.412
cdv3
Carnitine deficiency-associated gene expressed in ventricle 3.
      
 0.412
LOC106954136
Intersectin 2b.
     
 0.410
ENSPLAP00000017806
Uncharacterized protein.
     
 0.410
ENSPLAP00000030866
Uncharacterized protein.
     
 0.410
ENSPLAP00000030875
Uncharacterized protein.
     
 0.410
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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