Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc35f4Solute carrier family 35 member F4. (466 aa)    
Predicted Functional Partners:
ebna1bp2
EBNA1 binding protein 2.
      
 0.714
tmem268
Uncharacterized protein.
      
 0.713
anapc13
Anaphase promoting complex subunit 13.
      
 0.711
cdc42se2
CDC42 small effector 2.
      
 0.711
aldh16a1
Aldehyde dehydrogenase 16 family, member A1.
      
 0.687
tmem266
Transmembrane protein 266.
      
 0.686
bud13
BUD13 homolog.
      
 0.686
kcne4
Potassium voltage-gated channel, Isk-related family, member 4.
      
 0.685
stard3nl
STARD3 N-terminal like.
      
 0.685
LOC106960148
Ectonucleotide pyrophosphatase/phosphodiesterase 1.
      
 0.685
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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