STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc35f4Solute carrier family 35 member F4. (466 aa)    
Predicted Functional Partners:
tmem268
Uncharacterized protein.
      
 0.541
dhx40
DEAH (Asp-Glu-Ala-His) box polypeptide 40.
      
 0.510
tspan18
Tetraspanin.
      
 0.497
zc3h15
Zinc finger CCCH-type containing 15.
      
 0.483
ankrd40
Ankyrin repeat domain 40.
      
 0.480
atp5pb
ATP synthase peripheral stalk-membrane subunit b.
      
 0.420
LOC106945594
Transmembrane protein 266.
      
 0.420
tmem266
Transmembrane protein 266.
      
 0.420
aldh16a1
Aldehyde dehydrogenase 16 family, member A1.
      
 0.404
gpr19
G protein-coupled receptor 19.
      
 0.403
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.