Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
snx21Sorting nexin family member 21. (418 aa)    
Predicted Functional Partners:
lrrk1
Leucine-rich repeat kinase 1.
    
   0.752
ENSPLAP00000018306
Sorting nexin 29.
    
 
 0.744
rps6kc1
Ribosomal protein S6 kinase polypeptide 1.
    
 0.710
pxk
PX domain containing serine/threonine kinase.
      
 0.685
KIF16B
Kinesin family member 16B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.685
snx15
Sorting nexin 15.
    
 0.628
snx2
Sorting nexin 2.
      
 0.623
sh3pxd2b
SH3 and PX domains 2B.
      
 0.623
snx13
Sorting nexin 13.
      
 0.623
snx16
Sorting nexin 16.
      
 0.543
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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