mrps2 protein (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPLAP00000002570	dap3	ENSPLAP00000002570	ENSPLAP00000015161	Mitochondrial ribosomal protein S6.	Death associated protein 3.	0.998
ENSPLAP00000002570	mrps10	ENSPLAP00000002570	ENSPLAP00000031203	Mitochondrial ribosomal protein S6.	Mitochondrial ribosomal protein S10.	0.999
ENSPLAP00000002570	mrps11	ENSPLAP00000002570	ENSPLAP00000012931	Mitochondrial ribosomal protein S6.	Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.	0.999
ENSPLAP00000002570	mrps12	ENSPLAP00000002570	ENSPLAP00000006741	Mitochondrial ribosomal protein S6.	Mitochondrial ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.	0.999
ENSPLAP00000002570	mrps14	ENSPLAP00000002570	ENSPLAP00000013466	Mitochondrial ribosomal protein S6.	Mitochondrial ribosomal protein S14.	0.999
ENSPLAP00000002570	mrps15	ENSPLAP00000002570	ENSPLAP00000030187	Mitochondrial ribosomal protein S6.	Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.	0.999
ENSPLAP00000002570	mrps16	ENSPLAP00000002570	ENSPLAP00000014887	Mitochondrial ribosomal protein S6.	Mitochondrial ribosomal protein S16.	0.999
ENSPLAP00000002570	mrps2	ENSPLAP00000002570	ENSPLAP00000003396	Mitochondrial ribosomal protein S6.	Mitochondrial ribosomal protein S2.	0.998
ENSPLAP00000002570	mrps5	ENSPLAP00000002570	ENSPLAP00000027402	Mitochondrial ribosomal protein S6.	Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	0.999
ENSPLAP00000002570	mrps9	ENSPLAP00000002570	ENSPLAP00000006032	Mitochondrial ribosomal protein S6.	Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
dap3	ENSPLAP00000002570	ENSPLAP00000015161	ENSPLAP00000002570	Death associated protein 3.	Mitochondrial ribosomal protein S6.	0.998
dap3	mrps10	ENSPLAP00000015161	ENSPLAP00000031203	Death associated protein 3.	Mitochondrial ribosomal protein S10.	0.999
dap3	mrps11	ENSPLAP00000015161	ENSPLAP00000012931	Death associated protein 3.	Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.	0.999
dap3	mrps12	ENSPLAP00000015161	ENSPLAP00000006741	Death associated protein 3.	Mitochondrial ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.	0.998
dap3	mrps14	ENSPLAP00000015161	ENSPLAP00000013466	Death associated protein 3.	Mitochondrial ribosomal protein S14.	0.998
dap3	mrps15	ENSPLAP00000015161	ENSPLAP00000030187	Death associated protein 3.	Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.	0.998
dap3	mrps16	ENSPLAP00000015161	ENSPLAP00000014887	Death associated protein 3.	Mitochondrial ribosomal protein S16.	0.999
dap3	mrps2	ENSPLAP00000015161	ENSPLAP00000003396	Death associated protein 3.	Mitochondrial ribosomal protein S2.	0.996
dap3	mrps5	ENSPLAP00000015161	ENSPLAP00000027402	Death associated protein 3.	Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	0.999
dap3	mrps9	ENSPLAP00000015161	ENSPLAP00000006032	Death associated protein 3.	Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999