STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106953075Serine/threonine-protein phosphatase with EF-hands. (736 aa)    
Predicted Functional Partners:
igbp1
Immunoglobulin (CD79A) binding protein 1.
    
 0.826
anapc1
Anaphase promoting complex subunit 1.
    
 0.790
ppp4r3b
Protein phosphatase 4, regulatory subunit 3B.
   
 0.770
ppp4r3a
SMEK homolog 1, suppressor of mek1 (Dictyostelium).
   
 0.770
LOC106942144
Protein phosphatase 4, regulatory subunit 2b.
    
 0.764
LOC106934765
Uncharacterized protein.
    
 0.764
LOC106960330-2
WD_REPEATS_REGION domain-containing protein.
    
 0.753
wdr82
WD repeat domain 82.
    
 0.753
eif2s1
Eukaryotic translation initiation factor 2, subunit 1 alpha b.
   
 0.750
LOC106950427
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
   
 0.750
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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