ppp1r26 protein (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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[Homology]

Score

ppp1r26

Uncharacterized protein. (1134 aa)

Predicted Functional Partners:

mrps9

0.997

mrps5

0.996

ENSPLAP00000002570

0.995

mrps11

0.995

mrps16

0.995

mrps7

0.995

mrps10

0.995

mrps12

0.994

mrps14

0.994

mrps15

0.994

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPLAP00000002570	mrps10	ENSPLAP00000002570	ENSPLAP00000031203	Mitochondrial ribosomal protein S6.	Mitochondrial ribosomal protein S10.	0.999
ENSPLAP00000002570	mrps11	ENSPLAP00000002570	ENSPLAP00000012931	Mitochondrial ribosomal protein S6.	Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.	0.999
ENSPLAP00000002570	mrps12	ENSPLAP00000002570	ENSPLAP00000006741	Mitochondrial ribosomal protein S6.	Mitochondrial ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.	0.999
ENSPLAP00000002570	mrps14	ENSPLAP00000002570	ENSPLAP00000013466	Mitochondrial ribosomal protein S6.	Mitochondrial ribosomal protein S14.	0.999
ENSPLAP00000002570	mrps15	ENSPLAP00000002570	ENSPLAP00000030187	Mitochondrial ribosomal protein S6.	Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.	0.999
ENSPLAP00000002570	mrps16	ENSPLAP00000002570	ENSPLAP00000014887	Mitochondrial ribosomal protein S6.	Mitochondrial ribosomal protein S16.	0.999
ENSPLAP00000002570	mrps5	ENSPLAP00000002570	ENSPLAP00000027402	Mitochondrial ribosomal protein S6.	Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	0.999
ENSPLAP00000002570	mrps7	ENSPLAP00000002570	ENSPLAP00000026286	Mitochondrial ribosomal protein S6.	Mitochondrial ribosomal protein S7.	0.999
ENSPLAP00000002570	mrps9	ENSPLAP00000002570	ENSPLAP00000006032	Mitochondrial ribosomal protein S6.	Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
ENSPLAP00000002570	ppp1r26	ENSPLAP00000002570	ENSPLAP00000003402	Mitochondrial ribosomal protein S6.	Uncharacterized protein.	0.995
mrps10	ENSPLAP00000002570	ENSPLAP00000031203	ENSPLAP00000002570	Mitochondrial ribosomal protein S10.	Mitochondrial ribosomal protein S6.	0.999
mrps10	mrps11	ENSPLAP00000031203	ENSPLAP00000012931	Mitochondrial ribosomal protein S10.	Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.	0.999
mrps10	mrps12	ENSPLAP00000031203	ENSPLAP00000006741	Mitochondrial ribosomal protein S10.	Mitochondrial ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.	0.999
mrps10	mrps14	ENSPLAP00000031203	ENSPLAP00000013466	Mitochondrial ribosomal protein S10.	Mitochondrial ribosomal protein S14.	0.999
mrps10	mrps15	ENSPLAP00000031203	ENSPLAP00000030187	Mitochondrial ribosomal protein S10.	Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.	0.999
mrps10	mrps16	ENSPLAP00000031203	ENSPLAP00000014887	Mitochondrial ribosomal protein S10.	Mitochondrial ribosomal protein S16.	0.999
mrps10	mrps5	ENSPLAP00000031203	ENSPLAP00000027402	Mitochondrial ribosomal protein S10.	Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.	0.999
mrps10	mrps7	ENSPLAP00000031203	ENSPLAP00000026286	Mitochondrial ribosomal protein S10.	Mitochondrial ribosomal protein S7.	0.999
mrps10	mrps9	ENSPLAP00000031203	ENSPLAP00000006032	Mitochondrial ribosomal protein S10.	Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
mrps10	ppp1r26	ENSPLAP00000031203	ENSPLAP00000003402	Mitochondrial ribosomal protein S10.	Uncharacterized protein.	0.995