STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106945226Dystrobrevin. (612 aa)    
Predicted Functional Partners:
ppp1r21
Protein phosphatase 1, regulatory subunit 21.
    
   0.875
ENSPLAP00000016085
Uncharacterized protein.
    
   0.775
rsph3
Radial spoke head 3.
    
   0.775
SNTA1
Syntrophin alpha 1.
    
 
 0.696
sntb2
Syntrophin, beta 2.
    
 
 0.696
sntb1
Syntrophin, basic 1.
    
 
 0.696
sntg2
Syntrophin, gamma 2.
    
 
 0.641
sntg1
Syntrophin, gamma 1.
    
 
 0.641
aqp9
Aquaporin 9b; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.594
aqp3
Aquaporin 3 (Gill blood group); Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.594
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.