Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cacnb3Calcium channel, voltage-dependent, beta 3a. (487 aa)    
Predicted Functional Partners:
cacna2d2
Calcium channel, voltage-dependent, alpha 2/delta subunit 2b.
    
 0.833
LOC106944868
Calcium channel, voltage-dependent, alpha 2/delta subunit 1a.
    
 0.833
ENSPLAP00000026112
Calcium channel, voltage-dependent, alpha 2/delta subunit 2a.
    
 0.833
cacna2d1
Calcium voltage-gated channel auxiliary subunit alpha2delta 1.
    
 0.833
LOC106938178
VWFA domain-containing protein.
    
 0.803
ENSPLAP00000001151
Uncharacterized protein.
    
 0.803
LOC106945208
Calcium channel, voltage dependent, alpha2/delta subunit 3.
    
 0.803
ENSPLAP00000019713
VWFA domain-containing protein.
    
 0.803
ENSPLAP00000021781
VGCC_alpha2 domain-containing protein.
    
 0.803
CACNA2D4
Calcium voltage-gated channel auxiliary subunit alpha2delta 4.
    
 0.803
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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