Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
slc35e3Solute carrier family 35 member E3. (313 aa)    
Predicted Functional Partners:
nup107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
 
    
 0.739
slc35c1
Solute carrier family 35 member C1.
      
 0.719
rnf217
RBR-type E3 ubiquitin transferase.
   
  
 0.702
slc35f3
Solute carrier family 35 member F3b.
      
 0.690
slc35b2
Solute carrier family 35 member B2.
      
 0.679
slc35d1
Solute carrier family 35 member D1a.
      
 0.627
LOC106946519
Solute carrier family 35 member D1b.
      
 0.627
LOC106942067
Uncharacterized protein.
   
    0.582
TGDS
TDP-glucose 4,6-dehydratase.
   
 
 0.562
slc35g1
Solute carrier family 35 member G1.
      
 0.556
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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