Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC106941293Protocadherin 18a. (1142 aa)    
Predicted Functional Partners:
lysmd3
LysM, putative peptidoglycan-binding, domain containing 3.
      
 0.542
LOC106956981
Lysyl oxidase-like 2a.
    
 0.526
LOC106950887
Kelch-like family member 32.
      
 0.522
dipk2a
Divergent protein kinase domain 2Ab.
      
 0.518
LOC106934752
Zona pellucida glycoprotein 3f, tandem duplicate 1.
      
 0.509
gpr19
G protein-coupled receptor 19.
      
 0.494
LOC106938192
Zona pellucida glycoprotein 2, like 2.
    
 0.474
rab3ip
RAB3A interacting protein (rabin3).
      
 0.471
LOC106944592
Cilia and flagella associated protein 52.
     
 0.435
LOC106964665
RAB3A interacting protein (rabin3)-like 1.
      
 0.435
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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