Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC106963208Nanos homolog 1; Belongs to the nanos family. (232 aa)    
Predicted Functional Partners:
pum2
Pumilio RNA-binding family member 2.
   
 
 0.907
pum1
Pumilio RNA-binding family member 1.
   
 
 0.907
cnot1
CCR4-NOT transcription complex, subunit 1.
    
 
 0.902
piwil1
Piwi-like RNA-mediated gene silencing 1; Belongs to the argonaute family.
   
 
 0.804
cnot3
CCR4-NOT transcription complex, subunit 3a.
    
 
 0.803
LOC106945030
CCR4-NOT transcription complex, subunit 3b.
    
 
 0.803
LOC106953214
Uncharacterized protein.
    
 
 0.784
LOC106939213
Uncharacterized protein.
    
 
 0.784
samd4b
Sterile alpha motif domain containing 4B.
    
 
 0.784
cnot10
CCR4-NOT transcription complex, subunit 10.
    
   0.781
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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