Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ppp1cbSerine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (360 aa)    
Predicted Functional Partners:
ppp1cc
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.946
LOC106956112
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.946
LOC106955979
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.946
ppp1r16b
Protein phosphatase 1, regulatory subunit 16B.
  
 0.945
ppp1r7
Protein phosphatase 1, regulatory (inhibitor) subunit 7.
   
 0.944
ppp1r11
Protein phosphatase 1, regulatory (inhibitor) subunit 11.
    
 
 0.935
LOC106952165
Protein phosphatase 1 regulatory subunit.
  
 0.931
ENSPLAP00000007582
Uncharacterized protein.
    
 
 0.925
ENSPLAP00000001792
ANK_REP_REGION domain-containing protein.
  
 0.919
ENSPLAP00000004061
ANK_REP_REGION domain-containing protein.
  
 0.919
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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