STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ranbp3RAN binding protein 3b. (518 aa)    
Predicted Functional Partners:
rcc1
Regulator of chromosome condensation 1.
    
 
 0.916
nup214
Nup214_FG domain-containing protein.
     
 0.819
LOC106962366
Exportin 1 (CRM1 homolog, yeast) a.
    
 
 0.788
LOC106952069
Exportin 1 (CRM1 homolog, yeast) b.
    
 
 0.788
nup50
Nucleoporin 50.
     
 0.779
exosc10
Exosome component 10.
   
    0.761
LOC106948158
Uncharacterized protein.
    
 
 0.761
rae1
Ribonucleic acid export 1.
   
 
 0.740
NUP62
Nucleoporin 62.
   
 
 0.697
nxt2
Nuclear transport factor 2-like export factor 2.
     
 0.692
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.