STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106944326Mothers against decapentaplegic homolog. (503 aa)    
Predicted Functional Partners:
smad3
Mothers against decapentaplegic homolog.
   
0.985
SMAD3
Mothers against decapentaplegic homolog.
   
0.985
lef1
Lymphoid enhancer-binding factor 1.
    
 0.979
LOC106957970
Mothers against decapentaplegic homolog.
   
0.978
smad9
Mothers against decapentaplegic homolog.
   
0.978
smad1
Mothers against decapentaplegic homolog.
   
0.972
LOC106938824
Mothers against decapentaplegic homolog.
   
0.970
LOC106934411
Mothers against decapentaplegic homolog.
   
0.965
LOC106940894
Mothers against decapentaplegic homolog.
   
0.965
ENSPLAP00000028836
V-ski avian sarcoma viral oncogene homolog a.
    
 0.963
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.