Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106944326Mothers against decapentaplegic homolog. (503 aa)    
Predicted Functional Partners:
LOC106938824
Mothers against decapentaplegic homolog.
   
0.987
LOC106934411
Mothers against decapentaplegic homolog.
   
0.987
SMAD3
Mothers against decapentaplegic homolog.
   
0.987
LOC106957970
Mothers against decapentaplegic homolog.
   
0.987
smad1
Mothers against decapentaplegic homolog.
   
0.986
ENSPLAP00000028836
V-ski avian sarcoma viral oncogene homolog a.
    
 0.986
smad9
Mothers against decapentaplegic homolog.
   
0.986
skil
SKI-like proto-oncogene a.
    
 0.985
lef1
Lymphoid enhancer-binding factor 1.
    
 0.977
LOC106945827
V-ski avian sarcoma viral oncogene homolog b.
    
 0.967
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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