STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106945834Si:rp71-1f1.4; Belongs to the arylamine N-acetyltransferase family. (283 aa)    
Predicted Functional Partners:
aox1
Aldehyde oxidase 6.
   
 
 0.612
xdh
Xanthine dehydrogenase.
   
 
 0.612
LOC106950447
Cytochrome P450, family 1, subfamily D, polypeptide 1; Belongs to the cytochrome P450 family.
   
 
 0.610
LOC106941452
Cytochrome P450, family 1, subfamily A; Belongs to the cytochrome P450 family.
   
 
 0.610
ENSPLAP00000027424
WD repeat domain 18.
   
 0.596
ENSPLAP00000012859
Rhomboid, veinlet-like 3 (Drosophila).
    
  0.580
pes1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.546
tex10
Testis expressed 10.
    
 0.540
ripk4
Receptor-interacting serine-threonine kinase 4.
    
  0.511
ENSPLAP00000028939
Receptor-interacting serine-threonine kinase 3; Belongs to the protein kinase superfamily.
    
  0.511
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.