Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
gmdsGDP-mannose 4,6-dehydratase. (371 aa)    
Predicted Functional Partners:
tsta3
Tissue specific transplantation antigen P35B.
 0.999
gmppb
GDP-mannose pyrophosphorylase B.
    
 0.995
gmppa
GDP-mannose pyrophosphorylase Ab.
    
 0.989
LOC106952548
Poly [ADP-ribose] polymerase.
    
 
 0.946
LOC106944565
Poly [ADP-ribose] polymerase.
    
 
 0.946
dpm1
Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.
  
 
 0.878
ENSPLAP00000029696
UDP-glucuronate decarboxylase 1.
  
 0.875
hif1an
Hypoxia inducible factor 1 subunit alpha inhibitor.
    
   0.871
alg1
ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase.
  
 
 0.864
gale
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
    
 0.812
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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