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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MARCHF6Membrane associated ring-CH-type finger 6. (915 aa)    
Predicted Functional Partners:
ENSPLAP00000007808
RING-CH-type domain-containing protein.
  
  
 
0.904
cnot2
CCR4-NOT transcription complex, subunit 2.
    
 
 0.818
LOC106946362
NOT2_3_5 domain-containing protein.
    
 
 0.818
ube2g2
Ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.803
ube2j2
Ubiquitin-conjugating enzyme E2, J2 (UBC6 homolog, yeast).
    
 
 0.759
syvn1
Synovial apoptosis inhibitor 1, synoviolin.
    
 
 0.753
amfr
Autocrine motility factor receptor b.
    
 
 0.753
LOC106962768
C1q and TNF related 12.
    
 
 0.748
ENSPLAP00000001591
Zgc:136908; Belongs to the AAA ATPase family.
    
 
 0.729
spata5l1
Spermatogenesis associated 5-like 1.
    
 
 0.729
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.