STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF207Ring finger protein 207. (563 aa)    
Predicted Functional Partners:
LOC106944898
Hairy-related 12.
    
 
 0.623
LOC106965131
Hairy and enhancer of split related-7.
    
 
 0.617
LOC106936016
Nucleolar protein 9.
      
 0.594
LOC106936021
Polynucleotide 5'-hydroxyl-kinase NOL9-like.
      
 0.594
LOC106960032
Tripartite motif containing 35-28.
      
 0.589
gpr153
G protein-coupled receptor 153.
    
 
 0.538
ppil2
Peptidylprolyl isomerase (cyclophilin)-like 2.
      
 0.528
rffl
Ring finger and FYVE-like domain containing E3 ubiquitin protein ligase.
      
 0.517
gins3
GINS complex subunit 3.
      
 0.507
thoc7
THO complex 7.
      
 0.499
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.