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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pbkPDZ binding kinase. (358 aa)    
Predicted Functional Partners:
LOC106961723
Baculoviral IAP repeat containing 5a.
   
 0.969
melk
Non-specific serine/threonine protein kinase.
   
 0.962
ube2c
Ubiquitin-conjugating enzyme E2C; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.955
dlgap5
Discs, large (Drosophila) homolog-associated protein 5.
   
  
 0.951
ttk
Ttk protein kinase.
   
  
 0.950
kif11
Kinesin family member 11; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.944
cdc20
Cell division cycle 20 homolog.
   
 0.943
nusap1
Nucleolar and spindle associated protein 1.
   
  
 0.943
LOC106950807
Baculoviral IAP repeat containing 5b.
   
 0.942
ndc80
NDC80 kinetochore complex component.
   
  
 0.938
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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