STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106952513Brambleberry. (626 aa)    
Predicted Functional Partners:
palb2
PALB2_WD40 domain-containing protein.
   
 0.808
ndufab1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.808
ENSPLAP00000019556
PNPLA domain-containing protein.
    
 0.794
aasdh
Aminoadipate-semialdehyde dehydrogenase.
    
 0.737
crls1
Cardiolipin synthase 1.
    
 0.729
LOC106942134
Patatin-like phospholipase domain containing 3.
    
 0.726
ENSPLAP00000011245
PNPLA domain-containing protein.
    
 0.726
LOC106939005
PNPLA domain-containing protein.
    
 0.726
pnpla2
Patatin-like phospholipase domain containing 2.
    
 0.726
pnpla4
PNPLA domain-containing protein.
    
 0.726
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.