Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lmbr1lLimb development membrane protein 1-like; Belongs to the LIMR family. (492 aa)    
Predicted Functional Partners:
eprs1
Uncharacterized protein.
    
 
 0.735
EPRS1
Glutamyl-prolyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
    
 
 0.735
LOC106959281
Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
    
 
 0.702
setd1b
SET domain containing 1B, histone lysine methyltransferase a.
      
 0.683
wnt8b
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
      
 0.674
lum
Lumican.
      
 0.629
sigmar1
Sigma non-opioid intracellular receptor 1.
    
 
 0.599
ENSPLAP00000005924
Uncharacterized protein.
    
 
 0.597
slc35f3
Solute carrier family 35 member F3b.
      
 0.571
fanca
Fanconi_A_N domain-containing protein.
    
 
 0.570
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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