STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cisd2CDGSH iron sulfur domain 2. (135 aa)    
Predicted Functional Partners:
ddb1
Damage-specific DNA binding protein 1.
    
 
 0.802
DDA1
DET1 and DDB1 associated 1.
    
 
 0.674
LOC106965009
DET1 and DDB1 associated 1.
    
 
 0.674
lemd3
LEM domain containing 3.
    
 
 0.575
LOC106937047
Uncharacterized protein.
    
 
 0.575
LOC106935436
RNA binding motif protein 39b.
    
 
 0.575
ndufs5
NADH:ubiquinone oxidoreductase subunit S5.
   
   0.479
cul4b
Cullin 4B; Belongs to the cullin family.
    
 
 0.467
cul4a
Cullin 4A; Belongs to the cullin family.
    
 
 0.467
atp5pd
ATP synthase subunit d, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the cent [...]
   
 
 0.436
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.