Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tbckTBC1 domain containing kinase. (887 aa)    
Predicted Functional Partners:
LOC106953389
Zgc:154077.
    
 
 0.985
LOC106935182
Interleukin 6 receptor.
    
 
 0.931
tusc2
Tumor suppressor 2, mitochondrial calcium regulator.
    
   0.912
ppp1r21
Protein phosphatase 1, regulatory subunit 21.
   
 
 0.861
RBPMS
RNA binding protein, mRNA processing factor.
    
   0.822
nme6
Nucleoside diphosphate kinase.
   
  
 0.721
LOC106954723
Canopy FGF signaling regulator 2.
      
 0.717
POLR2E
RNA polymerase II subunit E.
      
 0.704
LOC106961886
MOB kinase activator 1A.
      
 0.684
pdap1
Pdgfa associated protein 1b.
      
 0.682
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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