Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC106945208Calcium channel, voltage dependent, alpha2/delta subunit 3. (1048 aa)    
Predicted Functional Partners:
LOC106937701
Voltage-dependent calcium channel gamma-1 subunit; Regulatory subunit of the voltage-gated calcium channel that gives rise to L-type calcium currents in skeletal muscle. Regulates channel inactivation kinetics.
    
 0.804
CACNG1
Voltage-dependent calcium channel gamma-1 subunit; Regulatory subunit of the voltage-gated calcium channel that gives rise to L-type calcium currents in skeletal muscle. Regulates channel inactivation kinetics.
    
 0.804
cacnb3
Calcium channel, voltage-dependent, beta 3a.
    
 0.803
cacnb4
Calcium channel, voltage-dependent, beta 4a subunit.
    
 0.803
LOC106938228
Calcium channel, voltage-dependent, beta 4b subunit.
    
 0.803
cacnb1
Calcium channel, voltage-dependent, beta 1 subunit.
    
 0.803
LOC106954456
Calcium channel, voltage-dependent, beta 2b.
    
 0.803
ENSPLAP00000027693
Calcium channel, voltage-dependent, beta 3b.
    
 0.803
cacnb2
Calcium channel, voltage-dependent, beta 2a.
    
 0.803
cacna1a
Calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b.
   
 0.800
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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