STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106945830Kruppel-like factor 6a. (281 aa)    
Predicted Functional Partners:
sp1
Sp1 transcription factor.
    
0.681
JUND
BZIP domain-containing protein.
   
 0.643
mcm5
DNA helicase; Belongs to the MCM family.
    
 
 0.626
atf3
Activating transcription factor 3.
   
 0.615
LOC106962473
ANK_REP_REGION domain-containing protein.
    
 0.606
ENSPLAP00000028929
BRCT domain-containing protein.
    
 0.606
ENSPLAP00000014192
NDK domain-containing protein.
    
 0.604
jun
Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family.
   
 0.599
LOC106956726
JunE proto-oncogene, AP-1 transcription factor subunit.
   
 0.599
rrm2
Ribonucleotide reductase M2 polypeptide.
      
 0.594
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.