STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106934530FCS-type domain-containing protein. (607 aa)    
Predicted Functional Partners:
LOC106935560
THAP-type domain-containing protein.
    
 0.891
rnf2
Ring finger protein 2.
    
 0.864
RING1
Ring finger protein 1.
    
 0.864
tfdp1
Transcription factor.
   
 0.848
pcgf6
Polycomb group ring finger 6.
    
 0.843
pcgf1
Polycomb group ring finger 1.
    
 0.843
ENSPLAP00000007593
DUF4801 domain-containing protein.
   
 0.832
ENSPLAP00000020417
Uncharacterized protein.
   
 0.832
YY1
YY1 transcription factor b.
    
 0.827
LOC106963705
YY1 transcription factor.
    
 0.827
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.