Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106936683Zgc:113307. (361 aa)    
Predicted Functional Partners:
wdr90
WD repeat domain 90.
    
   0.481
lrrc28
Leucine rich repeat containing 28.
  
 
  0.454
ENSPLAP00000007448
Uncharacterized protein.
  
     0.452
LRRC18
Leucine rich repeat containing 18.
  
     0.447
lrr1
Zgc:77287.
  
   
 0.438
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
  0.437
ENSPLAP00000031657
Uncharacterized protein.
  
     0.437
ENSPLAP00000015815
Leucine rich repeat containing 18a.
  
     0.432
lrrc20
Leucine rich repeat containing 20.
  
     0.427
ENSPLAP00000021903
Uncharacterized protein.
  
     0.426
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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