STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000003814Cholinergic receptor, nicotinic, alpha 4b. (628 aa)    
Predicted Functional Partners:
chrna1
Cholinergic receptor, nicotinic, alpha 1 (muscle).
  
0.840
LOC106964609
Uncharacterized protein.
  
 
0.773
ENSPLAP00000023672
Cholinergic receptor, nicotinic, beta 2.
  
 
0.771
LOC106946896
Uncharacterized protein.
  
 
0.751
LOC106943489
Cholinergic receptor, nicotinic, alpha 5.
  
 
0.723
ENSPLAP00000017934
Cholinergic receptor, nicotinic, beta 3b (neuronal).
  
 
0.722
LOC106961694
Cholinergic receptor, nicotinic, beta polypeptide 3a.
  
 
0.720
LOC106961695
Cholinergic receptor, nicotinic, alpha 6.
  
 
0.702
ENSPLAP00000030921
Uncharacterized protein.
  
 
0.702
chrng
Cholinergic receptor, nicotinic, gamma.
  
 
 
0.694
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.