STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pacs2Phosphofurin acidic cluster sorting protein 2. (880 aa)    
Predicted Functional Partners:
WDR37
WD repeat domain 37.
    
 
 0.675
LOC106955656
WD repeat domain 37.
    
 
 0.675
UBE2O
Ubiquitin conjugating enzyme E2 O.
      
 0.533
mrpl38
Mitochondrial ribosomal protein L38.
      
 0.504
rmdn2
Regulator of microtubule dynamics 2.
      
 0.404
sigmar1
Sigma non-opioid intracellular receptor 1.
      
 0.404
bcap31
B cell receptor associated protein 31.
      
 0.400
bcap29
Uncharacterized protein.
      
 0.400
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.