Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pltpPhospholipid transfer protein. (483 aa)    
Predicted Functional Partners:
LOC106935619
Si:dkey-24p1.6.
    
   0.915
LOC106938462
Uncharacterized protein.
    
 0.889
LOC106938461
Uncharacterized protein.
    
 0.889
adpgk
ADP-dependent glucokinase.
    
   0.757
sel1l
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
    
   0.723
LOC106943456
Ganglioside induced differentiation associated protein 1; Belongs to the GST superfamily.
      
 0.714
LOC106941892
Ganglioside-induced differentiation-associated protein 1-like.
      
 0.714
LOC106957660
Uncharacterized protein.
      
 0.714
LOC106936010
Unc-5 netrin receptor C.
      
 0.714
LOC106950964
Apolipoprotein Db; Belongs to the calycin superfamily. Lipocalin family.
      
 0.712
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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