STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptpdc1Protein tyrosine phosphatase domain containing 1a. (690 aa)    
Predicted Functional Partners:
ENSPLAP00000003701
Wnt ligand secretion mediator.
    
 0.723
LOC106957133
Porcupine O-acyltransferase like; Belongs to the membrane-bound acyltransferase family.
    
 0.718
porcn
Porcupine O-acyltransferase; Belongs to the membrane-bound acyltransferase family.
    
 0.718
ryk
Receptor like tyrosine kinase.
    
 0.661
LOC106954136
Intersectin 2b.
    
  0.657
ENSPLAP00000017806
Uncharacterized protein.
    
  0.657
ENSPLAP00000030866
Uncharacterized protein.
    
  0.657
ENSPLAP00000030875
Uncharacterized protein.
    
  0.657
LOC106951267
Uncharacterized protein.
    
 0.567
notum
Notum, palmitoleoyl-protein carboxylesterase a.
    
 0.567
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.