STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000003898Protein kinase domain-containing protein. (345 aa)    
Predicted Functional Partners:
ENSPLAP00000028939
Receptor-interacting serine-threonine kinase 3; Belongs to the protein kinase superfamily.
  
 
 0.841
LOC106953753
Rho related BTB domain containing 4.
   
 0.785
ENSPLAP00000000575
annotation not available
   
 0.785
rhobtb2
Rho related BTB domain containing 2a.
   
 0.785
CDC42
Cell division cycle 42.
   
 0.784
LOC106951125
Uncharacterized protein.
   
 0.784
LOC106960695
Ras homolog family member V.
   
 0.784
ENSPLAP00000005089
Uncharacterized protein.
   
 0.784
RND3
Rho family GTPase 3a.
   
 0.784
ENSPLAP00000009486
BTB domain-containing protein.
   
 0.784
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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