STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
snx5Sorting nexin; Involved in several stages of intracellular trafficking. (400 aa)    
Predicted Functional Partners:
snx6
Sorting nexin; Involved in several stages of intracellular trafficking.
  
  
0.971
snx2
Sorting nexin 2.
   
0.952
ENSPLAP00000006783
Sorting nexin 1b.
   
0.952
LOC106951219
Sorting nexin 1a.
   
0.925
snx8
Sorting nexin 8a.
   
 0.847
SNX4
Sorting nexin 4.
   
 0.815
ENSPLAP00000015336
Uncharacterized protein.
   
 0.815
LOC106961418
PX domain-containing protein.
   
 0.815
igf2r
Insulin-like growth factor 2 receptor.
     
 0.805
SNX7
Sorting nexin 7.
   
0.773
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.