STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem147Transmembrane protein 147. (236 aa)    
Predicted Functional Partners:
ncln
Nicalin.
    
 
 0.891
tmco1
Calcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling.
   
 
 0.888
ccdc47
Coiled-coil domain containing 47.
    
 
 0.887
lin54
Lin-54 DREAM MuvB core complex component.
   
 0.880
lin52
Lin-52 DREAM MuvB core complex component.
   
 0.845
lin9
Lin-9 DREAM MuvB core complex component.
    
 0.840
rpl11
Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
   
   0.789
LOC106958153
Zgc:109965.
    
 
 0.786
LOC106955741
Ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.
    
   0.784
rpl32
Ribosomal protein L32.
    
   0.784
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.