mrrf protein (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPLAP00000002570	mrpl17	ENSPLAP00000002570	ENSPLAP00000005820	Mitochondrial ribosomal protein S6.	Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.	0.992
ENSPLAP00000002570	mrpl20	ENSPLAP00000002570	ENSPLAP00000012999	Mitochondrial ribosomal protein S6.	Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.	0.991
ENSPLAP00000002570	mrpl32	ENSPLAP00000002570	ENSPLAP00000028475	Mitochondrial ribosomal protein S6.	Mitochondrial ribosomal protein L32.	0.992
ENSPLAP00000002570	mrpl9	ENSPLAP00000002570	ENSPLAP00000008806	Mitochondrial ribosomal protein S6.	Mitochondrial ribosomal protein L9.	0.991
ENSPLAP00000002570	mrps10	ENSPLAP00000002570	ENSPLAP00000031203	Mitochondrial ribosomal protein S6.	Mitochondrial ribosomal protein S10.	0.999
ENSPLAP00000002570	mrps9	ENSPLAP00000002570	ENSPLAP00000006032	Mitochondrial ribosomal protein S6.	Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
ENSPLAP00000002570	mrrf	ENSPLAP00000002570	ENSPLAP00000003989	Mitochondrial ribosomal protein S6.	Mitochondrial ribosome recycling factor.	0.956
ENSPLAP00000002570	rpl11	ENSPLAP00000002570	ENSPLAP00000002940	Mitochondrial ribosomal protein S6.	Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.	0.985
ENSPLAP00000002570	rps9	ENSPLAP00000002570	ENSPLAP00000009983	Mitochondrial ribosomal protein S6.	Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.	0.981
ENSPLAP00000002570	tsfm	ENSPLAP00000002570	ENSPLAP00000006043	Mitochondrial ribosomal protein S6.	Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.	0.947
mrpl17	ENSPLAP00000002570	ENSPLAP00000005820	ENSPLAP00000002570	Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.	Mitochondrial ribosomal protein S6.	0.992
mrpl17	mrpl20	ENSPLAP00000005820	ENSPLAP00000012999	Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.	Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.	0.996
mrpl17	mrpl32	ENSPLAP00000005820	ENSPLAP00000028475	Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.	Mitochondrial ribosomal protein L32.	0.998
mrpl17	mrpl9	ENSPLAP00000005820	ENSPLAP00000008806	Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.	Mitochondrial ribosomal protein L9.	0.996
mrpl17	mrps10	ENSPLAP00000005820	ENSPLAP00000031203	Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.	Mitochondrial ribosomal protein S10.	0.986
mrpl17	mrps9	ENSPLAP00000005820	ENSPLAP00000006032	Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.	Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.992
mrpl17	mrrf	ENSPLAP00000005820	ENSPLAP00000003989	Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.	Mitochondrial ribosome recycling factor.	0.974
mrpl17	rpl11	ENSPLAP00000005820	ENSPLAP00000002940	Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.	Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.	0.988
mrpl17	rps9	ENSPLAP00000005820	ENSPLAP00000009983	Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.	Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.	0.986
mrpl17	tsfm	ENSPLAP00000005820	ENSPLAP00000006043	Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.	Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.	0.972