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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rrbp1Ribosome binding protein 1a. (1133 aa)    
Predicted Functional Partners:
ENSPLAP00000020292
Uncharacterized protein.
    
 0.853
ranbp2
RAN binding protein 2.
    
 0.739
rbbp5
Retinoblastoma binding protein 5.
    
 0.686
rps2
Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.684
LOC106949253
Lysine (K)-specific demethylase 6B, b.
    
 0.677
LOC106935492
Lysine (K)-specific demethylase 6B, a.
    
 0.677
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.676
rps23
Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.671
LOC106961893
Eukaryotic translation initiation factor 4A, isoform 2; Belongs to the DEAD box helicase family.
   
 0.665
rpl12
Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.663
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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