STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106963185Carbohydrate sulfotransferase. (490 aa)    
Predicted Functional Partners:
chst12
Carbohydrate sulfotransferase.
  
  
 
0.892
CHST13
Carbohydrate sulfotransferase.
  
  
 
0.890
ENSPLAP00000002897
Leucine rich repeat containing 9.
     
 0.653
csgalnact2
Hexosyltransferase.
     
 0.641
chst11
Carbohydrate sulfotransferase.
  
  
 
0.625
LOC106938424
Rho GTPase activating protein 44.
      
 0.590
LOC106946589
Si:ch211-114m9.1.
      
 0.590
gns
N-acetylglucosamine-6-sulfatase; Belongs to the sulfatase family.
      
 0.590
LOC106948135
N-acetylglucosamine-6-sulfatase; Belongs to the sulfatase family.
      
 0.590
acmsd
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; Converts alpha-amino-beta-carboxymuconate-epsilon- semialdehyde (ACMS) to alpha-aminomuconate semialdehyde (AMS). Belongs to the metallo-dependent hydrolases superfamily.
      
 0.590
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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