STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pxkPX domain containing serine/threonine kinase. (559 aa)    
Predicted Functional Partners:
rps6kc1
Ribosomal protein S6 kinase polypeptide 1.
     
 0.524
snx21
Sorting nexin family member 21.
      
 0.495
ykt6
YKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family.
     
 0.490
sh3pxd2b
SH3 and PX domains 2B.
      
 0.482
stx6
Syntaxin 6.
    
 0.480
stx8
Syntaxin 8.
    
 0.480
stx10
Syntaxin 10.
    
 0.480
rubcn
Rubicon autophagy regulator.
    
 0.451
vti1a
Vesicle transport through interaction with t-SNAREs 1A.
     
 0.443
vti1b
Vesicle transport through interaction with t-SNAREs 1B.
     
 0.443
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.