Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000004035Uncharacterized protein. (195 aa)    
Predicted Functional Partners:
ENSPLAP00000029763
Ig-like domain-containing protein.
   
 
 0.958
LOC106950512
Protocadherin 12.
    
   0.898
ptprc
Uncharacterized protein.
   
 0.719
ENSPLAP00000004014
Uncharacterized protein.
   
 0.715
ENSPLAP00000008379
annotation not available
   
 0.715
fcer1g
Fc fragment of IgE, high affinity I, receptor for; gamma polypeptide.
   
 0.715
LOC106942586
Tyrosine-protein kinase.
    
 0.614
ENSPLAP00000013416
Uncharacterized protein.
     
 0.614
ENSPLAP00000015478
Spleen tyrosine kinase.
    
 0.614
LOC106942241
Tyrosine-protein kinase ZAP-70-like.
    
 0.614
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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