STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
opa3Outer mitochondrial membrane lipid metabolism regulator OPA3. (156 aa)    
Predicted Functional Partners:
rpp14
Ribonuclease P/MRP 14 subunit.
   
    0.718
LOC106941768
Uncharacterized protein.
      
 0.594
ENSPLAP00000007687
Transmembrane protein 126A.
      
 0.550
PNPT1
Polyribonucleotide nucleotidyltransferase 1.
      
 0.493
ATAD3A
ATPase family AAA domain containing 3A.
      
 0.491
gpn2
GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.
   
    0.438
sfxn4
Sideroflexin 4.
      
 0.424
tubd1
Tubulin, delta 1; Belongs to the tubulin family.
      
 0.418
mocs1
Molybdenum cofactor synthesis 1.
      
 0.418
LOC106958028
Cytochrome P450, family 20, subfamily A, polypeptide 1.
      
 0.416
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.