Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106937382Coiled-coil domain containing 85A, like. (392 aa)    
Predicted Functional Partners:
bud13
BUD13 homolog.
      
 0.500
LOC106954039
Fibronectin type-III domain-containing protein.
   
 
 0.498
LOC106954037
Uncharacterized protein.
   
 
 0.498
ina
Internexin neuronal intermediate filament protein, alpha b; Belongs to the intermediate filament family.
      
 0.494
arhgap23
Rho GTPase activating protein 23a.
    
 
 0.484
LOC106941413
Uncharacterized protein.
    
 
 0.484
znf622
Zinc finger protein 622.
      
 0.446
LOC106940142
D-aminoacyl-tRNA deacylase 2.
      
 0.431
snx16
Sorting nexin 16.
      
 0.429
ENSPLAP00000006438
Rho GTPase activating protein 21b.
    
 
 0.426
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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