STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106956601KxDL motif containing 1. (185 aa)    
Predicted Functional Partners:
borcs8
BLOC-1 related complex subunit 8.
   
 0.978
borcs6
Si:dkey-72l14.4.
    
 0.977
bloc1s2
Biogenesis of lysosomal organelles complex-1, subunit 2.
    
 0.974
snapin
SNAP associated protein.
    
 0.969
borcs5
BLOC-1 related complex subunit 5.
   
 0.965
bloc1s1
Biogenesis of lysosomal organelles complex-1, subunit 1.
    
 
 0.949
borcs7
BLOC-1 related complex subunit 7.
   
 0.909
lrrc45
Leucine rich repeat containing 45.
    
  0.896
rnf4
RING-type domain-containing protein.
    
  0.847
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
 
 
    0.812
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.